PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008153
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 226aa    MW: 25116.1 Da    PI: 7.1116
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41929263PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-192171256
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+ +l+g+
  Aan008153 21 RYRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAAVSLRGA 71
               59*******.**********883....5*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.4E-342184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-312179IPR001471AP2/ERF domain
CDDcd000186.59E-202180No hitNo description
PROSITE profilePS5103223.8542178IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-222180IPR016177DNA-binding domain
PfamPF008472.7E-122170IPR001471AP2/ERF domain
PRINTSPR003671.3E-102233IPR001471AP2/ERF domain
PRINTSPR003671.3E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MAKKSTAGEP IGSRPVGSEI RYRGVRKRPW GRFAAEIRDP WKKARVWLGT FDSAEDAARA  60
YDAAAVSLRG AKAKTNFPVS HQVPEFYIDN HKQKQDGLYK LQHVNSHDVI INQARPTASS  120
LSSTVESTSG PRVSYANHRP VQIKKAAPDD DCHSNCDSSS SVVDDEYFSS SRQPLPFDLN  180
FPPPVDEIAT GEDSGDLFVT ALCLQFFYKS TDLPLDVICN FLVYFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A6e-232279664ATERF1
2gcc_A6e-232279664ATERF1
1gcc_A6e-232279361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.206470.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001305578.13e-51ethylene-responsive transcription factor 3-like
SwissprotQ9SXS83e-38ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A124SC954e-64A0A124SC95_CYNCS; AP2/ERF domain-containing protein
STRINGPGSC0003DMT4000373598e-50(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-23ethylene responsive element binding factor 3